Anomaly detection for graph-based data

Diffusion modeling within the representational space of a variational autoencoder enables state-of-the-art results.

Anomaly detection is the identification of data that diverges significantly from established norms, which can indicate harmful activity. It’s a particularly tough challenge in the case of graph-based data, where anomaly detection is based not only on data values but on topological relationships within the graph. Because anomalies tend to be rare, it can be hard to find enough examples to train a machine learning model on the complexities of anomaly detection in graphs.

In a paper we presented last week at the International Conference on Web Search and Data Mining (WSDM), we describe a new method for synthesizing training data for graph-based anomaly detectors. Our method combines a variational graph autoencoder, which learns a probability distribution that can be used to generate random samples, with diffusion modeling, which learns to convert random noise into intelligible outputs.

In tests, we compared anomaly detectors trained with synthetic data generated through our method with detectors trained using five previous approaches to data augmentation. We compared the models on five datasets, using three different metrics, for a total of 15 experiments. In 13 of those experiments, our model came out on top; different models were the top performers on the other two.

Graph-based modeling

Graphs are the natural way to represent data movement through networks, whether they’re computer networks, communication networks, or networks of interactions, as between buyers and sellers on an e-commerce site. Anomaly detection in graphs can thus help detect server attacks, spam, fraud, and other types of abuse.

Related content
Slice-level detection of robots (SLIDR) uses deep-learning and optimization techniques to ensure that advertisers aren’t charged for robotic or fraudulent ad clicks.

In recent years, graph analysis has, like most fields, benefited from deep learning. Graph neural networks build up graph representations iteratively: first, they embed the data corresponding to nodes in the graph; then they produce embeddings that combine node embeddings with those of adjacent nodes; then they produce embeddings that combine those higher-level embeddings; and so on, until some fixed termination point. Ultimately, the model produces embeddings that capture information about whole neighborhoods of the graph. (In our experiments, we decided on four-hop neighborhoods.)

The complexity of graphs — the need to represent data both topologically and quantitatively — means that models for analyzing them need extra training data, which can be scarce in the wild. Hence the need for synthetic training data.

Latent-space diffusion

At its core, our data synthesis model is a variational graph autoencoder. “Autoencoder” means that it’s trained to output the same data it receives as input. In-between the input and output layers, however, is a bottleneck layer that forces the network to learn a compressed representation of the input.

“Variational” means that the model’s training objective encourages it not only to faithfully reproduce inputs but also to learn compressed representations whose distribution adheres to some prespecified shape, such as a Gaussian distribution. This means that, during the data synthesis phase, random samples from that distribution are likely to result in realistic-looking data.

The autoencoder’s compressed representations define a representational space, and it’s within that space that we apply diffusion modeling. The autoencoder produces an embedding of the input graph, and our model iteratively adds noise to it. A denoiser then performs the same process in reverse, iteratively denoising the embedding.

At left is a beige rectangle labeled "Graph space" and at right a larger blue rectangle labeled "Latent space". In the top row of the graph space, an input graph passes to a GNN encoder, whose output, z0, is in the latent space. Z0 goes through a diffusion process to become ZT, at the right edge of the top row. At the right edge of the bottom row, ZT passes leftward, to an MLP, to become Z-tilde-t-minus-1, which is iteratively denoised (T-1 times) to produce z-tilde-0, at the left edge of the latent space. Z-tilde-0 passes to an MLP decoder in the second row of the graph space, which generates a new graph from it.
Our approach applies diffusion modeling within the representational space (latent space) defined by the graph encoder. Noise is added to the input embedding (z0) in T discrete steps; the embedding is then denoised in another T steps.

 This is, effectively, a second check to ensure that the synthetic data looks like real data. If the distribution learned by the autoencoder doesn’t completely capture the characteristics of anomalous data, the addition of noise can “blur out” the mischaracterized features. The denoising step then fills in the blurred-out features with features more consistent with the training data.

Data synthesis

Our approach has a couple other wrinkles designed to improve the quality of the synthesized data. One is that, after the diffusion process, the reconstituted graph embedding passes to not one but several decoders, each specialized for a different aspect of the graph.

At minimum, there are two decoders, one for node features and one for graph structure. If the graphs in question include time series data, we use a third decoder to assign time stamps to nodes.

Related content
In the field of knowledge discovery, says Amazon Scholar Christos Faloutsos, “We want to choose the right tool for the given application.”

Another wrinkle is that, during training, we label graph nodes as either anomalous or normal, then train on both positive and negative examples. This helps the model learn the distinction between the two. But it also means that the model learns a distribution that’s conditioned on class labels, so that during synthesis, we can steer it toward samples that will result in graphs that contain anomalies.

Finally, it was important that our model be able to generate heterogeneous graphs — that is, graphs with different node and edge types. In an e-commerce setting, for instance, nodes might represent buyers, sellers, and product pages, while edges might represent purchases, product views, reviews, and the like.

Consequently, as the encoder in our autoencoder, we use a heterogeneous-graph transformer, a module that has several modifications to enable it to handle heterogeneous graphs, including separate attention mechanisms for different node or edge types.

Taken together, these features of our model enable it to outperform its predecessors, and in the paper, we report an ablation study showing that each of these features contributes significantly to our model’s success.

Research areas

Related content

US, VA, Arlington
Are you looking to work at the forefront of Machine Learning (ML) and Artificial Intelligence (AI)? Would you be excited to apply AI algorithms to solve real world problems with significant impact? The Amazon Web Services Professional Services (ProServe) team is seeking a skilled Senior Data Scientist to help customers implement AI/ML solutions and realize transformational business opportunities. This is a team of scientists, engineers, and architects working step-by-step with customers to build bespoke solutions that harness the power of AI. The team helps customers imagine and scope the use cases that will create the greatest value for their businesses, select and train and fine-tune the right models, define paths to navigate technical or business challenges, develop scalable solutions and applications, and launch them in production. The team provides guidance and implements best practices for applying AI responsibly and cost efficiently. You will work directly with customers and innovate in a fast-paced organization that contributes to game-changing projects and technologies. You will design and run experiments, research new algorithms, and find new ways of optimizing risk, profitability, and customer experience. We’re looking for Data Scientists capable of using AI/ML and other techniques to design, evangelize, and implement state-of-the-art solutions for never-before-solved problems. Key job responsibilities As an experienced Senior Data Scientist, you will be responsible for: 1. Lead end-to-end AI/ML and GenAI projects, from understanding business needs to data preparation, model development, solution deployment, and post-production monitoring 2. Collaborate with AI/ML scientists, engineers, and architects to research, design, develop, and evaluate AI algorithms and build ML systems and operations (MLOps) using AWS services to address real-world challenges 3. Interact with customers directly to understand the business challenges, deliver briefing and deep dive sessions to customers and guide them on adoption patterns and paths to production 4. Create and deliver best practice recommendations, tutorials, blog posts, publications, sample code, and presentations tailored to technical, business, and executive stakeholders 5. Provide customer and market feedback to product and engineering teams to help define product direction This is a customer-facing role with potential travel to customer sites as needed. About the team ABOUT AWS: Diverse Experiences Amazon values diverse experiences. Even if you do not meet all of the preferred qualifications and skills listed in the job description, we encourage candidates to apply. If your career is just starting, hasn’t followed a traditional path, or includes alternative experiences, don’t let it stop you from applying. Why AWS Amazon Web Services (AWS) is the world’s most comprehensive and broadly adopted cloud platform. We pioneered cloud computing and never stopped innovating — that’s why customers from the most successful startups to Global 500 companies trust our robust suite of products and services to power their businesses. Work/Life Balance We value work-life harmony. Achieving success at work should never come at the expense of sacrifices at home, which is why we strive for flexibility as part of our working culture. When we feel supported in the workplace and at home, there’s nothing we can’t achieve in the cloud. Inclusive Team Culture Here at AWS, it’s in our nature to learn and be curious. Our employee-led affinity groups foster a culture of inclusion that empower us to be proud of our differences. Ongoing events and learning experiences, including our Conversations on Race and Ethnicity (CORE) and AmazeCon conferences, inspire us to never stop embracing our uniqueness. Mentorship and Career Growth We’re continuously raising our performance bar as we strive to become Earth’s Best Employer. That’s why you’ll find endless knowledge-sharing, mentorship and other career-advancing resources here to help you develop into a better-rounded professional.
AU, VIC, Melbourne
We are scaling an advanced team of talented Machine Learning Scientists in Melbourne. This is your chance to join our a wider international community of ML experts changing the way our customers experience Amazon. Amazon's International Machine Learning team partners with businesses across the diverse Amazon ecosystem to drive innovation and deliver exceptional experiences for customers around the globe. Our team works on a wide variety of high-impact projects that deliver innovation at global scale, leveraging unrivalled access to the latest technology, whilst actively contributing to the research community by publishing in top machine learning conferences. As part of Amazon's Research and Development organization, you will have the opportunity to push the boundaries of applied science and deploy solutions that directly benefit millions of Amazon customers worldwide. Whether you are exploring the frontiers of generative AI, developing next-generation recommender systems, or optimizing agentic workflows, your work at Amazon has the power to truly change the world. Join us in this exciting journey as we redefine the present and the future of innovative applied science. Key job responsibilities - You will take on complex problems, work on solutions that either leverage or extend existing academic and industrial research, and utilize your own out-of-the-box pragmatic thinking. - In addition to coming up with novel solutions and building prototypes, you will deliver these to production in customer facing applications, in partnership with product and development teams. - You will publish papers internally and externally, contributing to advancing knowledge in the field of applied machine learning and generative AI. About the team Our team is composed of scientists with PhDs, with a strong publication profile and an appetite to see the impact of innovation on real-world systems at scale.
US, WA, Seattle
Innovators wanted! Are you an entrepreneur? A builder? A dreamer? This role is part of an Amazon Special Projects team that takes the company’s Think Big leadership principle to the next-level. We focus on creating entirely new products and services with a goal of positively impacting the lives of our customers. No industries or subject areas are out of bounds. If you’re interested in innovating at scale to address big challenges in the world, this is the team for you. Here at Amazon, we embrace our differences. We are committed to furthering our culture of inclusion. We have thirteen employee-led affinity groups, reaching 40,000 employees in over 190 chapters globally. We are constantly learning through programs that are local, regional, and global. Amazon’s culture of inclusion is reinforced within our 16 Leadership Principles, which remind team members to seek diverse perspectives, learn and be curious, and earn trust. Key job responsibilities * Partner with laboratory science teams on design and analysis of experiments * Originate and lead the development of new data collection workflows with cross-functional partners * Develop and deploy scalable bioinformatics analysis and QC workflows * Evaluate and incorporate novel bioinformatic approaches to solve critical business problems About the team Our team highly values work-life balance, mentorship and career growth. We believe striking the right balance between your personal and professional life is critical to life-long happiness and fulfillment. We care about your career growth and strive to assign projects and offer training that will challenge you to become your best.
US, WA, Seattle
Join the Worldwide Sustainability (WWS) organization where we capitalize on our size, scale, and inventive culture to build a more resilient and sustainable company. WWS manages our social and environmental impacts globally, driving solutions that enable our customers, businesses, and the world around us to become more sustainable. Sustainability Science and Innovation is a multi-disciplinary team within the WW Sustainability organization that combines science, analytics, economics, statistics, machine learning, product development, and engineering expertise to identify, evaluate and/or develop new science, technologies, and innovations that aim to address long-term sustainability challenges. We are looking for a Sr. Research Scientist to help us develop and drive innovative scientific solutions that will improve the sustainability of materials in our products, packaging, operations, and infrastructure. You will be at the forefront of exploring and resolving complex sustainability issues, bringing innovative ideas to the table, and making meaningful contributions to projects across SSI’s portfolio. This role not only demands technical expertise but also a strategic mindset and the agility to adapt to evolving sustainability challenges through self-driven learning and exploration. In this role, you will leverage your breadth of expertise in AI models and methodologies and industrial research experience to build scientific tools that inform sustainability strategies related to materials and energy. The successful applicant will lead by example, pioneering science-vetted data-driven approaches, and working collaboratively to implement strategies that align with Amazon’s long-term sustainability vision. Key job responsibilities - Develop scientific models that help solve complex and ambiguous sustainability problems, and extract strategic learnings from large datasets. - Work closely with applied scientists and software engineers to implement your scientific models. - Support early-stage strategic sustainability initiatives and effectively learn from, collaborate with, and influence stakeholders to scale-up high-value initiatives. - Support research and development of cross-cutting technologies for industrial decarbonization, including building the data foundation and analytics for new AI models. - Drive innovation in key focus areas including packaging materials, building materials, and alternative fuels. About the team Diverse Experiences: World Wide Sustainability (WWS) values diverse experiences. Even if you do not meet all of the qualifications and skills listed in the job description, we encourage candidates to apply. If your career is just starting, hasn’t followed a traditional path, or includes alternative experiences, don’t let it stop you from applying. Inclusive Team Culture: It’s in our nature to learn and be curious. Our employee-led affinity groups foster a culture of inclusion that empower us to be proud of our differences. Ongoing events and learning experiences, including our Conversations on Race and Ethnicity (CORE) and AmazeCon conferences, inspire us to never stop embracing our uniqueness. Mentorship & Career Growth: We’re continuously raising our performance bar as we strive to become Earth’s Best Employer. That’s why you’ll find endless knowledge-sharing, mentorship and other career-advancing resources here to help you develop into a better-rounded professional. Work/Life Balance: We value work-life harmony. Achieving success at work should never come at the expense of sacrifices at home, which is why flexible work hours and arrangements are part of our culture. When we feel supported in the workplace and at home, there’s nothing we can’t achieve.
US, WA, Seattle
We are a passionate team applying the latest advances in technology to solve real-world challenges. As a Data Scientist working at the intersection of machine learning and advanced analytics, you will help develop innovative products that enhance customer experiences. Our team values intellectual curiosity while maintaining sharp focus on bringing products to market. Successful candidates demonstrate responsiveness, adaptability, and thrive in our open, collaborative, entrepreneurial environment. Working at the forefront of both academic and applied research, you will join a diverse team of scientists, engineers, and product managers to solve complex business and technology problems using scientific approaches. You will collaborate closely with other teams to implement innovative solutions and drive improvements. At Amazon, we cultivate an inclusive culture through our Leadership Principles, which emphasize seeking diverse perspectives, continuous learning, and building trust. Our global community includes thirteen employee-led affinity groups with 40,000 members across 190 chapters, showcasing our commitment to embracing differences and fostering continuous learning through local, regional, and global programs. We prioritize work-life balance, recognizing it as fundamental to long-term happiness and fulfillment. Our team is committed to supporting your career development through challenging projects, mentorship opportunities, and targeted training programs that help you reach your full potential. Key job responsibilities Key job responsibilities * Deliver data analyses that optimize overall team process and guide decision-making * Deep dive to understand source of anomalies across a variety of datasets including low-level sequencing read data * Identify key metrics that are drivers to achieve team goals; work with senior stakeholders to refine your results * Use modern statistical methods to highlight insights for predictive & generative ML models and assay process * Perform correlation analysis, significance testing, and simulation on high- and low-fidelity datasets for various types of readouts * Generate reports with tables and visualization that support operational cycle analysis and one-off POC experiments * Collaborate with multi-disciplinary domain experts to support your findings and their experiments * Write well-tested scripts that can be promoted by our software teams to production pipelines * Learn about new statistical methods for our domain and adopt them in your work * Work fluently in SQL and Python. Be skilled in generating compelling visualizations. A day in the life New data has just landed and promoted to our datalake. You load the data and verify it's overall integrity by visualizing variation across target subsets. You realize we may have made progress toward our goals and begin to test the validity of your nominal results. At midday you grab lunch with new coworkers and learn about their fields or weird interests (there are many). You generate visualizations for the entire dataset and perform significance tests that reinforce specific findings. You meet with peers in the afternoon to discuss your findings and breakdown the remaining tasks to finalize your group report! About the team Innovators wanted! Are you an entrepreneur? A builder? A dreamer? This role is part of an Amazon Special Projects team that takes the company’s Think Big leadership principle to the limits. We focus on creating entirely new products and services with a goal of positively impacting the lives of our customers. No industries or subject areas are out of bounds. If you’re interested in innovating at scale to address big challenges in the world, this is the team for you.
GB, MLN, Edinburgh
Do you want a role with deep meaning and the ability to make a major impact? As part of Intelligent Talent Acquisition (ITA), you'll have the opportunity to reinvent the hiring process and deliver unprecedented scale, sophistication, and accuracy for Amazon Talent Acquisition operations. ITA is an industry-leading people science and technology organization made up of scientists, engineers, analysts, product professionals and more, all with the shared goal of connecting the right people to the right jobs in a way that is fair and precise. Last year we delivered over 6 million online candidate assessments, and helped Amazon deliver billions of packages around the world by making it possible to hire hundreds of thousands of workers in the right quantity, at the right location and at exactly the right time. You’ll work on state-of-the-art research, advanced software tools, new AI systems, and machine learning algorithms, leveraging Amazon's in-house tech stack to bring innovative solutions to life. Join ITA in using technologies to transform the hiring landscape and make a meaningful difference in people's lives. Together, we can solve the world's toughest hiring problems. A day in the life As a Research Scientist, you will partner on design and development of AI-powered systems to scale job analyses enterprise-wide, match potential candidates to the jobs they’ll be most successful in, and conduct validation research for top-of-funnel AI-based evaluation tools. You’ll have the opportunity to develop and implement novel research strategies using the latest technology and to build solutions while experiencing Amazon’s customer-focused culture. The ideal scientist must have the ability to work with diverse groups of people and inter-disciplinary cross-functional teams to solve complex business problems. About the team The Lead Generation & Detection Services (LEGENDS) organization is a specialized organization focused on developing AI-driven solutions to enable fair and efficient talent acquisition processes across Amazon. Our work encompasses capabilities across the entire talent acquisition lifecycle, including role creation, recruitment strategy, sourcing, candidate evaluation, and talent deployment. The focus is on utilizing state-of-the-art solutions using Deep Learning, Generative AI, and Large Language Models (LLMs) for recruitment at scale that can support immediate hiring needs as well as longer-term workforce planning for corporate roles. We maintain a portfolio of capabilities such as job-person matching, person screening, duplicate profile detection, and automated applicant evaluation, as well as a foundational competency capability used throughout Amazon to help standardize the assessment of talent interested in Amazon.
US, MA, N.reading
Amazon Industrial Robotics is seeking exceptional talent to help develop the next generation of advanced robotics systems that will transform automation at Amazon's scale. We're building revolutionary robotic systems that combine cutting-edge AI, sophisticated control systems, and advanced mechanical design to create adaptable automation solutions capable of working safely alongside humans in dynamic environments. This is a unique opportunity to shape the future of robotics and automation at an unprecedented scale, working with world-class teams pushing the boundaries of what's possible in robotic dexterous manipulation, locomotion, and human-robot interaction. This role presents an opportunity to shape the future of robotics through innovative applications of deep learning and large language models. At Amazon Industrial Robotics we leverage advanced robotics, machine learning, and artificial intelligence to solve complex operational challenges at an unprecedented scale. Our fleet of robots operates across hundreds of facilities worldwide, working in sophisticated coordination to fulfill our mission of customer excellence. - We are pioneering the development of robotics dexterous hands that: - Enable unprecedented generalization across diverse tasks - Are compliant but at the same time impact resistant - Can enable power grasps with the same reliability as fine dexterity and nonprehensile manipulation - Can naturally cope with the uncertainty of the environment - Leverage mechanical intelligence, multi-modal sensor feedback and advanced control techniques. The ideal candidate will contribute to research that bridges the gap between theoretical advancement and practical implementation in robotics. You will be part of a team that's revolutionizing how robots learn, adapt, and interact with their environment. Join us in building the next generation of intelligent robotics systems that will transform the future of automation and human-robot collaboration. Key job responsibilities - Design and implement novel sensing and actuation technologies for dexterous manipulation - Develop parallel paths for rapid finger design and prototyping combining different actuation and sensing technologies as well as different finger morphologies - Develop new testing and validation strategies to support fast continuous integration and modularity - Build and test full hand prototypes to validate the performance of the solution - Create hybrid approaches combining different actuation technologies, under-actuation, active and passive compliance - Hand integration into rest of the embodiment - Partner with cross-functional teams to rapidly create new concepts and prototypes - Work with Amazon's robotics engineering and operations teams to grasp their requirements and develop tailored solutions - Document the designs, performance, and validation of the final system
US, MA, North Reading
Amazon Industrial Robotics is seeking exceptional talent to help develop the next generation of advanced robotics systems that will transform automation at Amazon's scale. We're building revolutionary robotic systems that combine cutting-edge AI, sophisticated control systems, and advanced mechanical design to create adaptable automation solutions capable of working safely alongside humans in dynamic environments. This is a unique opportunity to shape the future of robotics and automation at an unprecedented scale, working with world-class teams pushing the boundaries of what's possible in robotic dexterous manipulation, locomotion, and human-robot interaction. This role presents an opportunity to shape the future of robotics through innovative applications of deep learning and large language models. At Amazon Industrial Robotics we leverage advanced robotics, machine learning, and artificial intelligence to solve complex operational challenges at an unprecedented scale. Our fleet of robots operates across hundreds of facilities worldwide, working in sophisticated coordination to fulfill our mission of customer excellence. We are pioneering the development of systems that: • Enables unprecedented generalization across diverse tasks • Enables contact-rich manipulation in different environments • Seamlessly integrates mobility and manipulation • Leverage mechanical intelligence, multi-modal sensor feedback and advanced control techniques. The ideal candidate will contribute to research that bridges the gap between theoretical advancement and practical implementation in robotics. You will be part of a team that's revolutionizing how robots learn, adapt, and interact with their environment. Join us in building the next generation of intelligent robotics systems that will transform the future of automation and human-robot collaboration!
IN, KA, Bengaluru
Amazon is looking for a passionate, talented, and inventive Scientist with a strong machine learning background to help build industry-leading Speech and Language technology. Our mission is to push the envelope in Automatic Speech Recognition (ASR), Natural Language Understanding (NLU), and Audio Signal Processing, in order to provide the best-possible experience for our customers. As a Speech and Language Scientist, you will work with talented peers to develop novel algorithms and modeling techniques to advance the state of the art in spoken language understanding. Your work will directly impact our customers in the form of products and services that make use of speech and language technology. You will leverage Amazon’s heterogeneous data sources and large-scale computing resources to accelerate advances in spoken language understanding. We are hiring in the area of speech and audio understanding technologies including ASR.
US, NY, New York
About Sponsored Products and Brands The Sponsored Products and Brands team at Amazon Ads is re-imagining the advertising landscape through industry leading generative AI technologies, revolutionizing how millions of customers discover products and engage with brands across Amazon.com and beyond. We are at the forefront of re-inventing advertising experiences, bridging human creativity with artificial intelligence to transform every aspect of the advertising lifecycle from ad creation and optimization to performance analysis and customer insights. We are a passionate group of innovators dedicated to developing responsible and intelligent AI technologies that balance the needs of advertisers, enhance the shopping experience, and strengthen the marketplace. If you're energized by solving complex challenges and pushing the boundaries of what's possible with AI, join us in shaping the future of advertising. About our team The Search Ranking and Interleaving (R&I) team within Sponsored Products and Brands is responsible for determining which ads to show and the quality of ads shown on the search page (e.g., relevance, personalized and contextualized ranking to improve shopper experience, where to place them, and how many ads to show on the search page. This helps shoppers discover new products while helping advertisers put their products in front of the right customers, aligning shoppers’, advertisers’, and Amazon’s interests. To do this, we apply a broad range of GenAI and ML techniques to continuously explore, learn, and optimize the ranking and allocation of ads on the search page. We are an interdisciplinary team with a focus on improving the SP experience in search by gaining a deep understanding of shopper pain points and developing new innovative solutions to address them. A day in the life As an Applied Scientist on this team, you will identify big opportunities for the team to make a direct impact on customers and the search experience. You will work closely with with search and retail partner teams, software engineers and product managers to build scalable real-time GenAI and ML solutions. You will have the opportunity to design, run, and analyze A/B experiments that improve the experience of millions of Amazon shoppers while driving quantifiable revenue impact while broadening your technical skillset. Key job responsibilities - Solve challenging science and business problems that balance the interests of advertisers, shoppers, and Amazon. - Drive end-to-end GenAI & Machine Learning projects that have a high degree of ambiguity, scale, complexity. - Develop real-time machine learning algorithms to allocate billions of ads per day in advertising auctions. - Develop efficient algorithms for multi-objective optimization using deep learning methods to find operating points for the ad marketplace then evolve them - Research new and innovative machine learning approaches.