Anomaly detection for graph-based data

Diffusion modeling within the representational space of a variational autoencoder enables state-of-the-art results.

Anomaly detection is the identification of data that diverges significantly from established norms, which can indicate harmful activity. It’s a particularly tough challenge in the case of graph-based data, where anomaly detection is based not only on data values but on topological relationships within the graph. Because anomalies tend to be rare, it can be hard to find enough examples to train a machine learning model on the complexities of anomaly detection in graphs.

In a paper we presented last week at the International Conference on Web Search and Data Mining (WSDM), we describe a new method for synthesizing training data for graph-based anomaly detectors. Our method combines a variational graph autoencoder, which learns a probability distribution that can be used to generate random samples, with diffusion modeling, which learns to convert random noise into intelligible outputs.

In tests, we compared anomaly detectors trained with synthetic data generated through our method with detectors trained using five previous approaches to data augmentation. We compared the models on five datasets, using three different metrics, for a total of 15 experiments. In 13 of those experiments, our model came out on top; different models were the top performers on the other two.

Graph-based modeling

Graphs are the natural way to represent data movement through networks, whether they’re computer networks, communication networks, or networks of interactions, as between buyers and sellers on an e-commerce site. Anomaly detection in graphs can thus help detect server attacks, spam, fraud, and other types of abuse.

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In recent years, graph analysis has, like most fields, benefited from deep learning. Graph neural networks build up graph representations iteratively: first, they embed the data corresponding to nodes in the graph; then they produce embeddings that combine node embeddings with those of adjacent nodes; then they produce embeddings that combine those higher-level embeddings; and so on, until some fixed termination point. Ultimately, the model produces embeddings that capture information about whole neighborhoods of the graph. (In our experiments, we decided on four-hop neighborhoods.)

The complexity of graphs — the need to represent data both topologically and quantitatively — means that models for analyzing them need extra training data, which can be scarce in the wild. Hence the need for synthetic training data.

Latent-space diffusion

At its core, our data synthesis model is a variational graph autoencoder. “Autoencoder” means that it’s trained to output the same data it receives as input. In-between the input and output layers, however, is a bottleneck layer that forces the network to learn a compressed representation of the input.

“Variational” means that the model’s training objective encourages it not only to faithfully reproduce inputs but also to learn compressed representations whose distribution adheres to some prespecified shape, such as a Gaussian distribution. This means that, during the data synthesis phase, random samples from that distribution are likely to result in realistic-looking data.

The autoencoder’s compressed representations define a representational space, and it’s within that space that we apply diffusion modeling. The autoencoder produces an embedding of the input graph, and our model iteratively adds noise to it. A denoiser then performs the same process in reverse, iteratively denoising the embedding.

At left is a beige rectangle labeled "Graph space" and at right a larger blue rectangle labeled "Latent space". In the top row of the graph space, an input graph passes to a GNN encoder, whose output, z0, is in the latent space. Z0 goes through a diffusion process to become ZT, at the right edge of the top row. At the right edge of the bottom row, ZT passes leftward, to an MLP, to become Z-tilde-t-minus-1, which is iteratively denoised (T-1 times) to produce z-tilde-0, at the left edge of the latent space. Z-tilde-0 passes to an MLP decoder in the second row of the graph space, which generates a new graph from it.
Our approach applies diffusion modeling within the representational space (latent space) defined by the graph encoder. Noise is added to the input embedding (z0) in T discrete steps; the embedding is then denoised in another T steps.

 This is, effectively, a second check to ensure that the synthetic data looks like real data. If the distribution learned by the autoencoder doesn’t completely capture the characteristics of anomalous data, the addition of noise can “blur out” the mischaracterized features. The denoising step then fills in the blurred-out features with features more consistent with the training data.

Data synthesis

Our approach has a couple other wrinkles designed to improve the quality of the synthesized data. One is that, after the diffusion process, the reconstituted graph embedding passes to not one but several decoders, each specialized for a different aspect of the graph.

At minimum, there are two decoders, one for node features and one for graph structure. If the graphs in question include time series data, we use a third decoder to assign time stamps to nodes.

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Another wrinkle is that, during training, we label graph nodes as either anomalous or normal, then train on both positive and negative examples. This helps the model learn the distinction between the two. But it also means that the model learns a distribution that’s conditioned on class labels, so that during synthesis, we can steer it toward samples that will result in graphs that contain anomalies.

Finally, it was important that our model be able to generate heterogeneous graphs — that is, graphs with different node and edge types. In an e-commerce setting, for instance, nodes might represent buyers, sellers, and product pages, while edges might represent purchases, product views, reviews, and the like.

Consequently, as the encoder in our autoencoder, we use a heterogeneous-graph transformer, a module that has several modifications to enable it to handle heterogeneous graphs, including separate attention mechanisms for different node or edge types.

Taken together, these features of our model enable it to outperform its predecessors, and in the paper, we report an ablation study showing that each of these features contributes significantly to our model’s success.

Research areas

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Applied Scientists in AWS Automated Reasoning are dedicated to making AWS the best computing service in the world for customers who require advanced and rigorous solutions for automated reasoning, privacy, and sovereignty. Key job responsibilities The successful candidate will: - Solve large or significantly complex problems that require deep knowledge and understanding of your domain and scientific innovation. - Own strategic problem solving, and take the lead on the design, implementation, and delivery for solutions that have a long-term quantifiable impact. - Provide cross-organizational technical influence, increasing productivity and effectiveness by sharing your deep knowledge and experience. - Develop strategic plans to identify fundamentally new solutions for business problems. - Assist in the career development of others, actively mentoring individuals and the community on advanced technical issues. A day in the life This is a unique and rare opportunity to get in early on a fast-growing segment of AWS and help shape the technology, product and the business. You will have a chance to utilize your deep technical experience within a fast moving, start-up environment and make a large business and customer impact. About the team Diverse Experiences Amazon Automated Reasoning values diverse experiences. Even if you do not meet all of the qualifications and skills listed in the job description, we encourage candidates to apply. If your career is just starting, hasn't followed a traditional path, or includes alternative experiences, don't let it stop you from applying. Why Amazon Automated Reasoning? At Amazon, automated reasoning is central to maintaining customer trust and delivering delightful customer experiences. Our organization is responsible for creating and maintaining a high bar for automated reasoning across all of Amazon's products and services. We offer talented automated reasoning professionals the chance to accelerate their careers with opportunities to build experience in a wide variety of areas including cloud, devices, retail, entertainment, healthcare, operations, and physical stores. Inclusive Team Culture In Amazon Automated Reasoning, it's in our nature to learn and be curious. Ongoing DEI events and learning experiences inspire us to continue learning and to embrace our uniqueness. Addressing the toughest automated reasoning challenges requires that we seek out and celebrate a diversity of ideas, perspectives, and voices. Training & Career Growth We're continuously raising our performance bar as we strive to become Earth's Best Employer. That's why you'll find endless knowledge-sharing, training, and other career-advancing resources here to help you develop into a better-rounded professional. Work/Life Balance We value work-life harmony. Achieving success at work should never come at the expense of sacrifices at home, which is why flexible work hours and arrangements are part of our culture. When we feel supported in the workplace and at home, there's nothing we can't achieve.